Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCGCCGCAGG
......((((((((((((((.&)))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001202403
GeneSymbolASB6
Binding site3865,3882
Score0.846
Seed0
Au0.309
Energy-21.8
Binding len17
Me-15.567
Phylopstem2.5899856875000005
Phylopflank3.8600185874999995
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure