Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGAGGATGTGGCTGTGGA
(((((((((((.....(((((&)))))......))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001202412
GeneSymbolZNF559
Binding site473,496
Score0.846
Seed1
Au0.441
Energy-17.2
Binding len23
Me-10.399
Phylopstem0.4316299909090909
Phylopflank0.41429867374999985
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure