Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCATATTTTGTATGCCCTGGA
.((.(((((((((.((((((..&))).))).)))))))))..)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001202435
GeneSymbolSCN1A
Binding site10875,10897
Score0.923
Seed0
Au0.662
Energy-17.7
Binding len22
Me-7.682
Phylopstem2.632696111111111
Phylopflank4.843597545
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure