Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTAATTGGGCTGCAGCTGTT
..((((((((((((.......&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001202435
GeneSymbolSCN1A
Binding site1039,1062
Score0.923
Seed1
Au0.544
Energy-20.4
Binding len14
Me-5.925
Phylopstem-0.37963529666666657
Phylopflank0.25710325575
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure