Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTACACAGCTGTAGA
(((((((((....((((((((&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001202476
GeneSymbolUBE2E1
Binding site1357,1375
Score0.846
Seed1
Au0.662
Energy-18.9
Binding len18
Me-12.641
Phylopstem0.29020537777777783
Phylopflank-0.19493835999999998
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure