Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGCTGCAGCA
.....(((((((((((.((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001202543
GeneSymbolCUX1
Binding site6930,6946
Score1.0
Seed0
Au0.662
Energy-23.9
Binding len16
Me-13.666
Phylopstem2.8514148363636362
Phylopflank2.837141237499999
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure