Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGATTTACAGCAGCTGCAGG
((((((((((.((..((((((&))))))....)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001202546
GeneSymbolCUX1
Binding site64,88
Score0.923
Seed1
Au0.485
Energy-22.6
Binding len24
Me-8.355
Phylopstem2.2621454
Phylopflank3.772062578749999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure