Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCACATTTGAAATAAACCACGGTTGCAGC
(((((((((.(((((((((((&))))))))............))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001202546
GeneSymbolCUX1
Binding site2776,2810
Score0.923
Seed1
Au0.61
Energy-21.7
Binding len34
Me-5.18
Phylopstem1.3247262826086956
Phylopflank0.5784460399750001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure