Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAAACCGCTGTGCTGTGGG
(((((((.((((((....(((&)))..))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001202548
GeneSymbolSYNJ2BP-COX16
Binding site26,48
Score0.846
Seed1
Au0.397
Energy-19.5
Binding len22
Me-7.22
Phylopstem0.48471557142857147
Phylopflank0.07023632833333335
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure