Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGTGGGCTGCGGG
((((((((((((((((.....&)))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001202559
GeneSymbolCHURC1-FNTB
Binding site2740,2758
Score0.923
Seed1
Au0.412
Energy-21.0
Binding len18
Me-3.938
Phylopstem0.20291476470588235
Phylopflank0.42170142000000005
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end3
Position3UTR
2D Structure