Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAATGACCGCTGCTCTGCCCTGCTCGAGCTGCAGA
((((((((((((((((..(((&)))..))))))))................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001358661
GeneSymbolC17orf113
Binding site660,698
Score0.923
Seed1
Au0.353
Energy-23.2
Binding len38
Me-3.938
Phylopstem-0.17827813124999992
Phylopflank0.01518118374999998
Longest consecutive pairings8
Position of longest consecutive pairings25
Pairings in 3prime end6
PositionCDS
2D Structure