Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGAATGCAGCCCAGCACTGCC
..(((((((.((((((((((.&)))....)))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001202858
GeneSymbolECM1
Binding site612,636
Score0.846
Seed1
Au0.353
Energy-19.4
Binding len24
Me-6.2
Phylopstem0.2591301999999999
Phylopflank0.54115717375
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure