Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCATGGCCGCAGACTGCAAA
((((((((((((((((.((((&)))).)))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001202859
GeneSymbolSHC1
Binding site526,549
Score1.0
Seed1
Au0.441
Energy-29.0
Binding len23
Me-3.938
Phylopstem0.8716720294117648
Phylopflank1.0899648812499998
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure