Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TATACTGTATGCCGGC
..((((((((((.((((.....&)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001203252
GeneSymbolMAPT
Binding site4641,4657
Score0.846
Seed1
Au0.515
Energy-17.7
Binding len16
Me-6.246
Phylopstem0.23480126
Phylopflank-0.11991661499999992
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure