Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGCAACTTGCAGCTA
....((((((((((((.((((&)))).)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001203260
GeneSymbolNDUFC2-KCTD14
Binding site1388,1407
Score1.0
Seed0
Au0.559
Energy-22.2
Binding len19
Me-9.547
Phylopstem2.1573640230769233
Phylopflank2.30454622875
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure