Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTGTGCATAAATGCGAGAGGGGCTGCAC
.(((((((.(..(((((....&.)))))..).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001358683
GeneSymbolANKRD40CL
Binding site101,131
Score0.923
Seed1
Au0.456
Energy-18.6
Binding len18
Me-11.021
Phylopstem-0.42024671428571425
Phylopflank-0.15608623875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure