Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGCAACTTGCAGCTA
....((((((((((((.((((&)))).)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001203262
GeneSymbolNDUFC2-KCTD14
Binding site1244,1263
Score0.846
Seed0
Au0.559
Energy-22.2
Binding len19
Me-9.547
Phylopstem4.273816461538461
Phylopflank3.2039147624999993
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure