Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACTGACTGTGCCAGT
..((((((((....((((((..&))))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001358699
GeneSymbolRNF227
Binding site854,873
Score0.846
Seed1
Au0.471
Energy-18.6
Binding len19
Me-13.275
Phylopstem-0.30736719999999995
Phylopflank0.2652352265
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure