Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCGACCTCCGAATGAAGCCACAGCC
.....((((.(((((((((((&)))))))))))..............)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204068
GeneSymbolANKS1B
Binding site1045,1075
Score0.923
Seed0
Au0.441
Energy-18.3
Binding len30
Me-14.908
Phylopstem1.711842272727273
Phylopflank2.5069209475000003
Longest consecutive pairings11
Position of longest consecutive pairings19
Pairings in 3prime end8
PositionCDS
2D Structure