Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGGTCTCTGAGCATGAGGAGGACTGTGTGTGAACTGCCAGCAGCTGTAGC
(((((((((((((.((.....&.)).))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204082
GeneSymbolMICOS10
Binding site510,565
Score0.846
Seed1
Au0.412
Energy-21.2
Binding len19
Me-4.794
Phylopstem0.5766506071428571
Phylopflank1.1188612925
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure