Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTTTACAGGGATCGCAATAGTAACTGTCTGCTTGTGGTAGTAGAAAGCTTGTGCCAGGC
.((((((((((((.((((((..&.))))))))))...............)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001204087
GeneSymbolKCNN3
Binding site7276,7337
Score0.923
Seed1
Au0.603
Energy-21.2
Binding len35
Me-4.65
Phylopstem0.2991866148148148
Phylopflank0.01225356750000002
Longest consecutive pairings10
Position of longest consecutive pairings24
Pairings in 3prime end6
Position3UTR
2D Structure