Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAACGATTGAAGCTGCT
..((((((.(((((((..(((&)))..))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204102
GeneSymbolDNAI7
Binding site171,191
Score0.846
Seed1
Au0.544
Energy-19.9
Binding len20
Me-6.013
Phylopstem0.18028396
Phylopflank-0.08145468349999996
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end6
Position5UTR
2D Structure