Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTTGCTGCTGCTGCT
..(((((.(((((...(((((&))))).))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204103
GeneSymbolPPT2
Binding site1477,1495
Score0.923
Seed0
Au0.5
Energy-19.0
Binding len18
Me-9.096
Phylopstem1.0527314
Phylopflank0.75881493525
Longest consecutive pairings5
Position of longest consecutive pairings13
Pairings in 3prime end5
Position3UTR
2D Structure