Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCT
..((((((((((((.(.((((&)))).).)))))))..................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001359
GeneSymbolDECR1
Binding site824,862
Score0.846
Seed1
Au0.544
Energy-18.8
Binding len38
Me-5.692
Phylopstem4.2355659
Phylopflank3.7765770287500007
Longest consecutive pairings7
Position of longest consecutive pairings24
Pairings in 3prime end6
PositionCDS
2D Structure