Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCAGCCGTGGGCCTGCT
..((((((((((((((((...&))))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204108
GeneSymbolBCL2L11
Binding site2910,2929
Score0.923
Seed1
Au0.5
Energy-21.8
Binding len19
Me-4.957
Phylopstem-0.20646746666666677
Phylopflank0.42369648000000015
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure