Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCGCAGCCGCCTGGTCTGCAGT
((((((((((((((((..((.&))..))))))))..)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204113
GeneSymbolBCL2L11
Binding site8,32
Score0.846
Seed1
Au0.328
Energy-24.4
Binding len24
Me-3.938
Phylopstem-0.15211582105263166
Phylopflank0.7088039532499999
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end5
Position5UTR
2D Structure