Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTACTAGGGGCTGGACCCTAGATTGGTTGCCAGGG
.(((((((..((((.(((....&.))).))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001204137
GeneSymbolMBD1
Binding site2148,2186
Score1.0
Seed1
Au0.485
Energy-24.5
Binding len19
Me-6.828
Phylopstem0.2476530857142857
Phylopflank0.3945040449999999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure