Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTCCACCTGCCTCCTGCAGCTGCC
..((((((((((..(..((((&.))))..)..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204139
GeneSymbolMBD1
Binding site753,782
Score0.846
Seed1
Au0.353
Energy-24.5
Binding len21
Me-7.336
Phylopstem0.6698606400000002
Phylopflank0.7684474600000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure