Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTACTAGGGGCTGGACCCTAGATTGGTTGCCAGGG
.(((((((..((((.(((....&.))).))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001204140
GeneSymbolMBD1
Binding site1980,2018
Score1.0
Seed1
Au0.485
Energy-24.5
Binding len19
Me-6.828
Phylopstem0.6046384571428571
Phylopflank0.25684145875000003
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure