Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCTCACCGCCTGCGT
.(((((..(((((.(((((((&)))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204140
GeneSymbolMBD1
Binding site979,999
Score0.923
Seed0
Au0.353
Energy-22.8
Binding len20
Me-8.507
Phylopstem2.140339142857143
Phylopflank1.1230547592500002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure