Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGGGGCTTCCCGCAGTGCC
..(((.((((((((.((((((&)))))).))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204147
GeneSymbolHDAC9
Binding site1007,1030
Score0.833
Seed0
Au0.485
Energy-20.0
Binding len23
Me-7.593
Phylopstem4.576083208333333
Phylopflank4.047190124999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure