Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCTGTCCGCAGCTGGGC
.(.(((((((((..((.((((&))))..))...))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204159
GeneSymbolSPHK2
Binding site2077,2100
Score0.923
Seed0
Au0.294
Energy-23.7
Binding len23
Me-7.497
Phylopstem3.113305888888889
Phylopflank2.8543582025000003
Longest consecutive pairings9
Position of longest consecutive pairings3
Pairings in 3prime end6
PositionCDS
2D Structure