Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCACATACAGCGGCTGCGC
.(((((((((.((((((.(((&))).))))...)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204160
GeneSymbolSPHK2
Binding site225,249
Score0.846
Seed1
Au0.324
Energy-22.6
Binding len24
Me-6.618
Phylopstem1.9031022222222223
Phylopflank0.8839139872499999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure