Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTTGCTCTGTTGCCAGGC
.(((((((.(((..((((((((&)))))).))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001204199
GeneSymbolSRP19
Binding site2935,2957
Score0.846
Seed1
Au0.485
Energy-20.7
Binding len22
Me-6.996
Phylopstem-0.6381809777777778
Phylopflank-0.04413793375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure