Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCACCGCAGCTGGGAC
((.(((((((((.(((.....&)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204199
GeneSymbolSRP19
Binding site1723,1739
Score0.923
Seed0
Au0.338
Energy-22.7
Binding len16
Me-6.784
Phylopstem0.8205589999999999
Phylopflank1.0671899925
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end3
Position3UTR
2D Structure