Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGGATCGCAGCTGCAGG
((((((((((((((.(.....&).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204204
GeneSymbolSEC14L2
Binding site1792,1809
Score0.846
Seed1
Au0.324
Energy-25.0
Binding len17
Me-4.673
Phylopstem-0.08282651428571433
Phylopflank0.22225652187499995
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure