Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTGCAGCCTGCTGGCCCCCATGGTCCTGGCCAGTGCAGCTGA
...(((((((((((((((((.&))).)))))))..........................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204268
GeneSymbolFXYD6-FXYD2
Binding site92,137
Score0.923
Seed0
Au0.441
Energy-21.6
Binding len45
Me-6.515
Phylopstem-0.013713122727272686
Phylopflank-0.10595024749999997
Longest consecutive pairings7
Position of longest consecutive pairings34
Pairings in 3prime end7
PositionCDS
2D Structure