Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGACTACTACCAAGAGCTGCAGA
((((((((..(((.(((.(((&)))...))).)))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204293
GeneSymbolMUC1
Binding site306,331
Score0.846
Seed1
Au0.559
Energy-19.2
Binding len25
Me-7.093
Phylopstem1.594683375
Phylopflank-0.07348189250000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure