Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTACACAAACCCAGCAGTGGCAGC
((((.(((((((((((((((.&)))))))...)))..))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204295
GeneSymbolMUC1
Binding site597,623
Score0.846
Seed0
Au0.412
Energy-19.6
Binding len26
Me-8.057
Phylopstem1.8702175500000002
Phylopflank0.85764693625
Longest consecutive pairings7
Position of longest consecutive pairings19
Pairings in 3prime end7
PositionCDS
2D Structure