Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCTGTGCTGTAAC
(((((((.((((((((.....&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204301
GeneSymbolAPP
Binding site2536,2552
Score1.0
Seed1
Au0.618
Energy-19.1
Binding len16
Me-6.251
Phylopstem2.2214825
Phylopflank3.3580702549999994
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure