Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTCGCAGCTGCCGCGGCGGTGGCTGCAGC
((((((((((.(((((..(((&.)))))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204352
GeneSymbolSPOCK3
Binding site101,131
Score0.923
Seed1
Au0.294
Energy-24.4
Binding len21
Me-6.762
Phylopstem2.3625415
Phylopflank1.4928883325000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure