Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTCGCAGCTGCCGCGGCGGTGGCTGCAGC
((((((((((.(((((..(((&.)))))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204353
GeneSymbolSPOCK3
Binding site129,159
Score0.923
Seed1
Au0.294
Energy-24.4
Binding len21
Me-6.762
Phylopstem1.3165254000000002
Phylopflank1.4280186625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure