Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGAGCTGCTAGTCATGAGCAGGCAGCAGCTGCAT
.((((((((((.((((.....&.)))).).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204386
GeneSymbolDLG1
Binding site1646,1685
Score0.974
Seed1
Au0.485
Energy-22.6
Binding len18
Me-7.14
Phylopstem4.303009727272729
Phylopflank2.55286880125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure