Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGAGCTGCTAGTCATGAGCAGGCAGCAGCTGCAT
.((((((((((.((((.....&.)))).).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204387
GeneSymbolDLG1
Binding site1271,1310
Score1.0
Seed1
Au0.485
Energy-22.6
Binding len18
Me-7.14
Phylopstem1.1801131636363638
Phylopflank1.0993384750000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure