Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACATCCGCCTCCCTATCCACCAAGAGCTT
....((((((((.((((((((&)))))))).))))................)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204398
GeneSymbolPITX2
Binding site762,796
Score0.808
Seed0
Au0.471
Energy-19.9
Binding len34
Me-10.836
Phylopstem5.137136000000001
Phylopflank5.812219355
Longest consecutive pairings8
Position of longest consecutive pairings26
Pairings in 3prime end8
PositionCDS
2D Structure