Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGTCTCAACTGCGCAAGCTGCT
..(((((((((((((..(.((&)).)..)))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001360551
GeneSymbolPABPN1
Binding site2144,2167
Score0.923
Seed1
Au0.382
Energy-21.0
Binding len23
Me-5.19
Phylopstem2.0558997125
Phylopflank1.4144085749999997
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure