Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTACAACCAATGTTTCAGCCAGATTTTGGCTTGCAGACTGCC
..((((((((((((((((((.&))))))))))........................)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204403
GeneSymbolANK3
Binding site4012,4056
Score0.923
Seed1
Au0.544
Energy-21.9
Binding len44
Me-4.957
Phylopstem2.8642796697674417
Phylopflank3.3455718562500008
Longest consecutive pairings10
Position of longest consecutive pairings34
Pairings in 3prime end7
PositionCDS
2D Structure