Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTACAGGGGCCGGGC
.((((((...(..(((((((..&)))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001360552
GeneSymbolPABPN1
Binding site697,714
Score0.846
Seed1
Au0.382
Energy-18.6
Binding len17
Me-13.042
Phylopstem3.2123071428571426
Phylopflank3.9527945662500006
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure