Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGGACACGTCTCAACTGCGCAAGCTGCT
..(((((((((((((..(.((&.)).)..)))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001360552
GeneSymbolPABPN1
Binding site989,1021
Score1.0
Seed1
Au0.382
Energy-21.3
Binding len24
Me-5.19
Phylopstem2.0025533375000006
Phylopflank1.4290792187499997
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure