Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCAGCAGCTGCC
..((((((((.((((((....&)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204426
GeneSymbolLIMK1
Binding site2826,2842
Score0.923
Seed1
Au0.544
Energy-23.8
Binding len16
Me-7.782
Phylopstem1.6477481250000001
Phylopflank2.6033739375000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure